IBWS: IST Bioinformatics Web Services
Welcome Description Documentation Availability Download Contacts Links Portal
 
Nota bene: this service is currently not available

Welcome

Description

Documentation
  SWS
  CABRI
  TP53

Availability

Download

Contacts

Links

Portal

IST Bioinformatics Web Services: CABRI: Bacteria strains

Services
The following Web Services are available:
getBacteriaIdsByName - getBacteriaIdsByProperty - getBacteriaById


getBacteriaIdsByName: Get bacteria strains ID searching by name
Input
ParameterDescriptionExample
libs Acronym(s) of searched CABRI catalogues (MANDATORY).
When more than one acronym are specified, they must be separated by a space.
No wild character (*,?,%) is allowed.		 BCCM_LMG
name Scientific name of searched bacteria strains (MANDATORY).
Wild character '*' is allowed.		 acetobacter*
format The format of the output (MANDATORY).
One among 'text', 'html', 'json'.		 json
Output
FormatOutput
text
html
BCCM_LMGLMG 5
BCCM_LMGLMG 12
BCCM_LMGLMG 1261
BCCM_LMGLMG 1262
BCCM_LMGLMG 1352
BCCM_LMGLMG 1354
BCCM_LMGLMG 1367(t2)
Test this Web Services
Libs: Name: Format:

getBacteriaIdsByProperty: Get bacteria strains ID searching by properties (all text)
Input
ParameterDescriptionExample
libs Acronym(s) of searched CABRI catalogues (MANDATORY).
When more than one acronym are specified, they must be separated by a space.
No wild character (*,?,%) is allowed.		 BCCM_LMG
text Query terms (MANDATORY).
Wild character '*' is allowed.		 acinetobacter*
format The format of the output (MANDATORY).
One among 'text', 'html', 'json'.		 json
Output
FormatOutput
text
html
BCCM_LMGLMG 991
BCCM_LMGLMG 993
BCCM_LMGLMG 1002
BCCM_LMGLMG 1003
BCCM_LMGLMG 1004
BCCM_LMGLMG 1021
BCCM_LMGLMG 1038
BCCM_LMGLMG 1052
Test this Web Services
Libs: Text: Format:

getBacteriaById: Get bacteria strains details searching by ID
Input
ParameterDescriptionExample
libs Acronym(s) of searched CABRI catalogues (MANDATORY).
When more than one acronym are specified, they must be separated by a space.
No wild character (*,?,%) is allowed.		 BCCM_LMG
ID Unique ID(s) for a record in the specified catalogue (MANDATORY).
Wild character '*' is allowed.		 LMG 991
format The format of the output (MANDATORY).
One among 'text', 'html', 'json'.		 json
Output
FormatOutput
text
html
Strain_numberLMG 991
Other_collection_numbersATCC 15308; CCEB 765; CCM 5593; CECT 452; CIP 64.8; Dijkshoorn et al. 78; Dijkshoorn serial no. 15; DSM 30008; Hugh 2197; LMG 10525; NCTC 7844; RUH 1063; Schaub and Hauber strain Biol. 1; USCC 1612
RestrictionsOpportunistic pathogen
Organism_typeBacteria
NameAcinetobacter baumannii, Bouvet and Grimont 1986 VP
Infrasubspecific_names-
Status-
Other_namesAcinetobacter anitratum, (Schaub and Hauber 1948) Brisou and Prévot 1954; Acinetobacter calcoaceticus, (Beijerinck 1911) Baumann, Doudoroff and Stanier 1968AL emend. Bouvet and Grimont 1986 VP
History<- 1967, National Collection of Type Cultures (NCTC) United Kingdom (Acinetobacter anitratum) <- 1949, I.Schaub (Bacterium anitratum)
Conditions_for_growthMedium 1, 30C; Medium 7, 30C
Form_of_supplyDried
ApplicationsProduction of urease
json
Test this Web Services
Libs: ID: Format:



Documentation

CABRI

Bacteria
Filamentous fungi
Yeasts
Plasmids
Phages
Cell lines
IBRD
General access

Welcome Description Documentation Availability Download Contacts Links Portal
Webmaster: Paolo Romano; Last update: January 28, 2020.