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IBWS documentation: TP53 General Web Services

Services
The following Web Services allows for general searches in all TP53 datasets:
getP53EntriesByField - getP53FieldsByField - getP53IdsByField

getP53EntriesByField: Retrieve complete entries by searching on any valid field (applies to any data set) (wsdl)

Inputs:
<dataset>
the name of the queried dataset
No wild characters are allowed
<field>
the name of the queried field (either in long or short form)
No wild characters are allowed
<query>
the query term
The wild character '*' is allowed as a final part of this input


Output:
The full record of matched entries


Example:
Inputs:
<dataset>: tp53_somatic
<field>: exon
<query>: 2


Output:
   Mutation_id 22536
   MUT_ID 84
   Exon 2
   Nucleotide 11036
   Codon_number 11
   Splice_site no
   CpG_site yes
   Type G:C>C:G
   Description G>C
   c_description c.31G>C
   Mut_rate 0.11
   WT_codon GAG
   Mutant_codon CAG
   WT_AA Glu
   Mutant_AA Gln
   Protein_description p.E11Q
   Mut_rateAA 0.11
   Effect missense
   Structural_motif N-term/Transactivation/NES
   Putative_stop 0
   Sample_name GCIY
   Sample_id 21340
   Sample_source cell-line
   Tumor_origin NA
   Topography STOMACH
   Short_topo STOMACH
   Topo_code C16
   Sub_topography Stomach, NOS
   Morphology Adenocarcinoma, NOS
   Morpho_code 8140/3
   P53_IHC NA
   Individual_id 20993
   Sex F
   Population NA
   Country NA
   Germline_mutation NA
   Tobacco NA
   Alcohol NA
   Exposure NA
   Infectious_agent NA
   Ref_id 2056
   PubMed_entry 15188009
Test this Web Services
Dataset:
Field:
Query:

getP53FieldByField: Retrieve defined fields by searching on any valid field (applies to any data set) (wsdl)

Inputs:
<dataset>
the name of the queried dataset
No wild characters are allowed
<field>
the name of the queried field (either in long or short form)
No wild characters are allowed
<query>
the query term
The wild character '*' is allowed as a final part of this input
<return_field>
the name of the queried field (either in long or short form)
No wild characters are allowed


Output:
The specified field in the matched entries


Example:
Inputs:
<dataset>: tp53_somatic
<field>: exon
<query>: 2
<return_field>: effect


Output:
   Effect large del
   Effect nonsense
   Effect missense
   Effect missense
   Effect missense
   Effect missense
   Effect silent
   Effect silent
   Effect missense
   Effect missense
   Effect silent
   Effect missense
   Effect other
   Effect FS
   Effect FS
   Effect missense
   Effect missense
   .......
Test this Web Services
Dataset:
Field:
Return field:
Query:

getP53IdsByField: (wsdl)

Inputs:
<dataset>
the name of the queried dataset
No wild characters are allowed
<field>
the name of the queried field (either in long or short form)
No wild characters are allowed
<query>
the query term
The wild character '*' is allowed as a final part of this input


Output:
Records unique identifiers of matched entries


Example:
Inputs:
<dataset>: tp53_somatic
<field>: exon
<query>: 2


Output:
   TP53_SOMATIC:22691
   TP53_SOMATIC:11332
   TP53_SOMATIC:25075
   TP53_SOMATIC:11948
   TP53_SOMATIC:11950
   TP53_SOMATIC:11938
   TP53_SOMATIC:11925
   TP53_SOMATIC:25285
   TP53_SOMATIC:4524
   TP53_SOMATIC:4523
   TP53_SOMATIC:18811
   TP53_SOMATIC:22509
   TP53_SOMATIC:24163
   .......
Test this Web Services
Dataset:
Field:
Query:



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