SeraDeg
Serum Degradation Analysis
Build August 10, 2017.
Upload data - Analyse data
Upload and Analyse together

SeraDeg at once: Upload file and perform analysis

For repeated analysis of the same data, we suggest you to upload the spectra file separately. It will remain available for six months.
Go to the upload page first and then to the analysis interface later.

NB! Move your mouse over the icon for a contextual help. Should you have any problem, see the help page.

  Job information
 
Job name:
 
Your email:
Country:
  Input data
 
Archive file:
(see example file )
Reference spectrum name:
Normalization peak: No    Yes, at m/z
 
  Advanced parameters   Show
 
Median filter parameters: Half window size:     Signal/noise ratio:
Total abundance thresholds: Lower:%     Upper:%
Higher mass peptides thresholds: Lower:%     Middle:%     Upper:%
 

For information, get in touch with:
Paolo Romano,
Mass Spectrometry and Proteomics,
IRCCS Ospedale Policlinico San Martino,
Email: paolo.romano@hsanmartino.it

If you use SeraDeg, please cite the following paper:
Romano P, Beitia San Vicente M, Profumo A.
A mass spectrometry based method and a software tool to assess degradation status of serum samples to be used in proteomics for biomarker discovery.
Journal of Proteomics. Volume 173, 2018, Pages 99-106.
PMID: 29242081; DOI: 10.1016/j.jprot.2017.12.004