Bioinformatics Laboratory - Ospedale Policlinico San Martino - Genova

Research interests

• Biomedical data management and integration.
• Network standards, technologies, tools and applications in bioinformatics.
• Mass Spectrometry data analysis.

Current projects

• Microbial Resource Research Infrastructure (MIRRI)
• Joint Research Unit MIRRI-IT
• EOSC-Life (submitted)
• Micro4Life (submitted)

Selected publications

• Romano P, Beitia San Vicente M, Profumo A. A mass spectrometry based method and a software tool to assess degradation status of serum samples to be used in proteomics for biomarker discovery. Journal of Proteomics 2018, 173: 99–106.
  DOI: doi:10.1371/10.1016/j.jprot.2017.12.004 PMID: 29242081

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• Gaëta BA, De Las Rivas J, et al. Ten simple rules for forming a scientific professional society. PLoS Comput Biol. 2017 Mar 23;13(3):e1005226.
  DOI: doi:10.1371/journal.pcbi.1005226 PMID: 28333920

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• Casaregola S, Vasilenko A, et al. An Information System for European culture collections: the way forward. Springerplus. 2016 Jun 17;5(1):772.
  Short URL: http://rdcu.be/twus DOI: doi:10.1186/s40064-016-2450-8 PMID: 27386258

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Network Tools

• Geena 2
  
• SeraDeg
  
• Multi Target Scan (MTS)
  
• biowep
  
• IST Bioinformatics Web Services
  
• Galaxy USMI Demonstrator
  

• CABRI
  
• CLIMA 2
  
• HyperCLDB
  
• European Collection for Biomedical Research (ECBR)
  
• Molecular Probe Data Base (MPDB)
  
• IARC TP53 Mutation Database on SRS
  
• BITS Library
• PLI: Protein-Ligand Interaction

• ICLC Cell Bank Web site
• ICLC Cell Bank Catalogue Search